Bacteroides helcogenes P 36-108

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides helcogenes P 36-108 is a mesophilic, chemoheterotrophic, gram-negative, rod-shaped bacterium that is obligately anaerobic and primarily found in the human gut and various animal intestines. This microbe thrives optimally at moderate temperatures, typically between 20-45°C, which categorizes it as a mesophile. Its chemoheterotrophic metabolism indicates that it derives its energy from organic compounds, using them as both carbon and energy sources, which is critical for its survival in nutrient-rich environments such as the intestines. As a gram-negative bacterium, Bacteroides helcogenes P 36-108 possesses a thin peptidoglycan layer surrounded by an outer membrane, which contributes to its resilience in hostile environments within the gut. The rod shape facilitates motility and colonization within the complex gut microbiome, allowing it to effectively navigate through the viscous intestinal contents. Primarily residing in the gastrointestinal tracts of humans and various animals, Bacteroides helcogenes plays a significant role in the digestion of complex carbohydrates, aiding in the breakdown of dietary fibers and the production of short-chain fatty acids, which are beneficial for host health. Its obligate anaerobic nature means it thrives in environments devoid of oxygen, making it well-suited to the oxygen-poor conditions of the gut. This microbe has been studied for its potential role in health and disease, particularly in relation to gut microbiota balance and its influence on metabolic processes. It may contribute to immune system modulation and has implications in understanding conditions such as obesity, inflammatory bowel diseases, and other metabolic disorders. Its adaptability and functional capacity within the gut microbiome underscore its significance in both ecological and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides helcogenes
StrainP 36-108

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides helcogenes P 36-108
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Bacteroides helcogenes P 36-108, complete sequence.

Gene Summary

Adenine Count

1105614 bp

Thymine Count

1105083 bp

Guanine Count

893364 bp

Cytosine Count

894845 bp

Genome Length

3998906 bp

Protein-coding Genes

3263 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
air synthase-related proteinBACHE_RS07035Not AvailableNegative1778209 - 177937842621.2
sensor histidine kinaseBACHE_RS07040Not AvailableNegative1779493 - 178047337430.3
lytr/algr family response regulator transcription factorBACHE_RS07045Not AvailableNegative1780490 - 178124829615.6
duf6268 family outer membrane beta-barrel proteinBACHE_RS07050Not AvailableNegative1781337 - 178241339455.1
arac family transcriptional regulatorBACHE_RS07055Not AvailableNegative1782592 - 178347933715.7
duf1848 domain-containing proteinBACHE_RS07060Not AvailablePositive1783608 - 178452234485.7
hypothetical proteinBACHE_RS07065Not AvailableNegative1784832 - 17850388386.98
lema family proteinBACHE_RS07070Not AvailableNegative1785241 - 178582221195.1
tpm domain-containing proteinBACHE_RS07075Not AvailableNegative1785930 - 178683232124.6
alpha/beta hydrolaseBACHE_RS07080Not AvailableNegative1786876 - 178791038965.5

Displaying genes 1451 – 1460 of 3361 in total

Metabolites

1604 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 1604 metabolites

Health Effects

No health effects information available for this bacterium.