Pseudothermotoga thermarum DSM 5069

Gram-negativeRodanaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Thermotogales

Family

Thermotogaceae

Genus

Pseudothermotoga

Description

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyThermotogaceae
GenusPseudothermotoga
SpeciesPseudothermotoga thermarum
StrainDSM 5069

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudothermotoga thermarum DSM 5069
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudothermotoga thermarum DSM 5069, complete sequence.

Gene Summary

Adenine Count

604861 bp

Thymine Count

612494 bp

Guanine Count

421811 bp

Cytosine Count

400777 bp

Genome Length

2039943 bp

Protein-coding Genes

2027 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
septum site-determining protein mincTHETH_RS00405A8F7A0Positive74627 - 7525922606.8
m20/m25/m40 family metallo-hydrolaseTHETH_RS00410O59196Positive75274 - 7627536327.2
m42 family metallopeptidaseTHETH_RS00415Not AvailablePositive76289 - 7730837743.5
m42 family metallopeptidaseTHETH_RS00420P55742Positive77305 - 7830936512.8
spor domain-containing proteinTHETH_RS00425Not AvailablePositive78312 - 7901626349.1
comea family dna-binding proteinTHETH_RS00430Q3TGW2Positive79013 - 7956420643.5
omph family outer membrane proteinTHETH_RS00435Not AvailablePositive79571 - 8005318603.7
lps export abc transporter atp-binding proteinTHETH_RS00440P33982Positive80050 - 8076026637.0
tigr00725 family proteinTHETH_RS00445O29139Positive80757 - 8128419068.2
glutamate--trna ligaseTHETH_RS00450A8F791Positive81277 - 8268354419.5

Displaying genes 81 – 90 of 2079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

124 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 124 metabolites

Health Effects

No health effects information available for this bacterium.