Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS49210 | Not Available | Negative | 975278 - 976087 | 28575.3 |
| spoiie family protein phosphatase | SCAB_RS04075 | Not Available | Positive | 976086 - 978224 | 75885.2 |
| s1 family peptidase | SCAB_RS04080 | Not Available | Negative | 978417 - 979844 | 46342.8 |
| hypothetical protein | SCAB_RS04085 | Not Available | Positive | 980527 - 980742 | 6663.88 |
| hlyd family efflux transporter periplasmic adaptor subunit | SCAB_RS04090 | Not Available | Positive | 980845 - 981651 | 28170.6 |
| nhlp family bacteriocin export abc transporter peptidase/permease/atpase subunit | SCAB_RS04095 | Not Available | Positive | 981648 - 983885 | 80588.1 |
| nhlp bacteriocin export abc transporter permease/atpase subunit | SCAB_RS04100 | Not Available | Positive | 983887 - 986709 | 100495.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS04105 | Not Available | Negative | 986870 - 988233 | 47373.8 |
| abc transporter permease subunit | SCAB_RS04110 | Not Available | Negative | 988230 - 989699 | 49581.7 |
| abc transporter substrate-binding protein | SCAB_RS04115 | Not Available | Negative | 989999 - 991492 | 52132.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |