Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SCAB_RS43430 | Not Available | Positive | 10121729 - 10122592 | 31691.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48905 | Not Available | Negative | 10122653 - 10122943 | 11178.5 |
| is3 family transposase | SCAB_RS43440 | Not Available | Positive | 10123257 - 10124509 | 47140.1 |
| hypothetical protein | SCAB_RS43445 | Not Available | Negative | 10124569 - 10124949 | 13419.2 |
| duf4157 domain-containing protein | SCAB_RS46115 | Not Available | Positive | 10125758 - 10127362 | 56732.5 |
| hypothetical protein | SCAB_RS43455 | Not Available | Positive | 10127557 - 10128072 | 18905.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS43460 | Not Available | Positive | 10128310 - 10128691 | 13070.0 |
| hypothetical protein | SCAB_RS43465 | Not Available | Positive | 10128940 - 10129284 | 11792.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS47190 | Not Available | Negative | 10129383 - 10129615 | 8445.0 |
| transposase | SCAB_RS43470 | Not Available | Positive | 10130200 - 10130505 | 11542.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |