Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SCAB_RS43190 | Not Available | Negative | 10073258 - 10074211 | 33722.6 |
| carotenoid oxygenase family protein | SCAB_RS43195 | Not Available | Positive | 10074387 - 10075922 | 57293.3 |
| mbl fold metallo-hydrolase | SCAB_RS43200 | Not Available | Positive | 10075930 - 10076583 | 23105.3 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS43205 | Not Available | Positive | 10076583 - 10077371 | 27343.7 |
| carboxymuconolactone decarboxylase family protein | SCAB_RS43210 | Not Available | Positive | 10077411 - 10078019 | 21685.8 |
| fumarylacetoacetate hydrolase family protein | SCAB_RS43215 | Not Available | Positive | 10078016 - 10078888 | 32430.3 |
| fumarylacetoacetate hydrolase family protein | SCAB_RS43220 | Not Available | Positive | 10078885 - 10079733 | 30427.4 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS43225 | Not Available | Positive | 10079745 - 10080533 | 27614.9 |
| aldehyde dehydrogenase family protein | SCAB_RS43230 | Not Available | Positive | 10080579 - 10082039 | 50462.0 |
| srpbcc family protein | SCAB_RS43235 | Not Available | Positive | 10082098 - 10082493 | 14659.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |