Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 48 protein | SCAB_RS43085 | Not Available | Negative | 10045998 - 10048913 | 103481.0 |
| glycoside hydrolase family 6 protein | SCAB_RS43090 | Not Available | Positive | 10049727 - 10051466 | 60001.7 |
| mfs transporter | SCAB_RS43095 | Not Available | Negative | 10051543 - 10053051 | 51998.6 |
| oxygenase mpab family protein | SCAB_RS43100 | Not Available | Negative | 10053161 - 10054381 | 43349.9 |
| tetr/acrr family transcriptional regulator | SCAB_RS43105 | Not Available | Positive | 10054631 - 10055296 | 23810.6 |
| tetr/acrr family transcriptional regulator | SCAB_RS43110 | Not Available | Positive | 10055882 - 10056472 | 21862.1 |
| smp-30/gluconolactonase/lre family protein | SCAB_RS43115 | Not Available | Positive | 10056850 - 10057827 | 34698.8 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS43120 | Not Available | Positive | 10057885 - 10058715 | 29498.5 |
| tetr/acrr family transcriptional regulator | SCAB_RS43125 | Not Available | Positive | 10058988 - 10059605 | 21844.3 |
| amidohydrolase family protein | SCAB_RS43130 | Not Available | Negative | 10059714 - 10061039 | 46683.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |