Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | SCAB_RS43035 | Not Available | Positive | 10033554 - 10034444 | 31793.3 |
| aspartate ammonia-lyase | SCAB_RS43040 | Not Available | Positive | 10034535 - 10035959 | 50562.5 |
| hypothetical protein | SCAB_RS43045 | Not Available | Positive | 10036246 - 10036584 | 12681.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS43050 | Not Available | Positive | 10036592 - 10037122 | 19786.9 |
| abc transporter atp-binding protein | SCAB_RS43055 | Not Available | Positive | 10037778 - 10038545 | 27101.5 |
| abc transporter permease | SCAB_RS43060 | Not Available | Positive | 10038776 - 10041277 | 86131.8 |
| dihydrofolate reductase family protein | SCAB_RS43065 | Not Available | Negative | 10041345 - 10041950 | 22004.0 |
| expansin exlx1 family cellulose-binding protein | SCAB_RS43070 | Not Available | Negative | 10042183 - 10043142 | 33393.9 |
| laci family dna-binding transcriptional regulator | SCAB_RS43075 | Not Available | Negative | 10043323 - 10044345 | 36766.1 |
| gh12 family glycosyl hydrolase domain-containing protein | SCAB_RS43080 | Not Available | Negative | 10044583 - 10045719 | 39215.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |