Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family peptidase | SCAB_RS42890 | Not Available | Negative | 9999536 - 10001296 | 59121.5 |
| hypothetical protein | SCAB_RS42895 | Not Available | Negative | 10001703 - 10002431 | 24234.4 |
| ferritin-like domain-containing protein | SCAB_RS42900 | Not Available | Positive | 10002642 - 10003367 | 25954.1 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | SCAB_RS42905 | Not Available | Negative | 10003527 - 10004354 | 29061.9 |
| lytic polysaccharide monooxygenase | SCAB_RS42910 | Not Available | Negative | 10004741 - 10005346 | 22255.0 |
| gnat family n-acetyltransferase | SCAB_RS42915 | Not Available | Negative | 10005882 - 10006544 | 23873.5 |
| winged helix-turn-helix transcriptional regulator | SCAB_RS42920 | Not Available | Negative | 10006822 - 10007199 | 14376.2 |
| rida family protein | SCAB_RS42925 | Not Available | Positive | 10007345 - 10007752 | 14115.1 |
| duf6153 family protein | SCAB_RS49510 | Not Available | Positive | 10008323 - 10008760 | 14588.0 |
| plp-dependent cysteine synthase family protein | SCAB_RS42930 | Not Available | Positive | 10009519 - 10010733 | 43133.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |