Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS42840 | Not Available | Negative | 9988859 - 9989515 | 22648.2 |
| type 1 glutamine amidotransferase-like domain-containing protein | SCAB_RS42845 | Not Available | Positive | 9989753 - 9990421 | 24803.2 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS42850 | Not Available | Negative | 9990439 - 9990948 | 19056.8 |
| duf6069 family protein | SCAB_RS42855 | Not Available | Positive | 9991244 - 9991684 | 14855.6 |
| pp2c family protein-serine/threonine phosphatase | SCAB_RS42860 | Not Available | Negative | 9991774 - 9992814 | 37149.9 |
| m1 family metallopeptidase | SCAB_RS42865 | Not Available | Negative | 9993185 - 9994600 | 51199.8 |
| duf418 domain-containing protein | SCAB_RS42870 | Not Available | Positive | 9994955 - 9996124 | 40750.4 |
| hypothetical protein | SCAB_RS42875 | Not Available | Negative | 9996178 - 9997155 | 34430.4 |
| tetr/acrr family transcriptional regulator | SCAB_RS42880 | Not Available | Negative | 9997771 - 9998484 | 25685.3 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS42885 | Not Available | Positive | 9998612 - 9999286 | 23345.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |