Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | SCAB_RS42355 | Not Available | Negative | 9880155 - 9880688 | 19362.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS42360 | Not Available | Positive | 9880852 - 9881580 | 26124.3 |
| snapalysin family zinc-dependent metalloprotease | SCAB_RS42365 | Not Available | Negative | 9881645 - 9882196 | 19229.9 |
| flavodoxin family protein | SCAB_RS42370 | Not Available | Positive | 9882634 - 9883242 | 21996.7 |
| (2fe-2s)-binding protein | SCAB_RS42375 | Not Available | Positive | 9883304 - 9883957 | 22452.0 |
| fad binding domain-containing protein | SCAB_RS42380 | Not Available | Positive | 9883964 - 9884944 | 35159.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | SCAB_RS42385 | Not Available | Positive | 9884941 - 9887154 | 79616.6 |
| helix-turn-helix domain-containing protein | SCAB_RS42390 | Not Available | Negative | 9887499 - 9888386 | 32797.1 |
| sdr family oxidoreductase | SCAB_RS42395 | Not Available | Positive | 9888527 - 9889351 | 29005.1 |
| tetr family transcriptional regulator | SCAB_RS42400 | Not Available | Positive | 9889456 - 9890082 | 22888.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |