Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SCAB_RS42250 | Not Available | Positive | 9852993 - 9853589 | 21739.0 |
| gnat family n-acetyltransferase | SCAB_RS42255 | Not Available | Negative | 9853621 - 9854190 | 20904.5 |
| zinc-dependent alcohol dehydrogenase | SCAB_RS42260 | Not Available | Negative | 9854187 - 9855236 | 35735.1 |
| fumarylacetoacetate hydrolase family protein | SCAB_RS42265 | Not Available | Negative | 9855233 - 9856093 | 31237.2 |
| iclr family transcriptional regulator | SCAB_RS42270 | Not Available | Negative | 9856165 - 9857025 | 29859.2 |
| ilvd/edd family dehydratase | SCAB_RS42275 | Not Available | Positive | 9857076 - 9858788 | 60241.4 |
| hypothetical protein | SCAB_RS47185 | Not Available | Positive | 9859145 - 9859612 | 16255.5 |
| m48 family metalloprotease | SCAB_RS42290 | Not Available | Positive | 9859605 - 9861728 | 74388.6 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | SCAB_RS42295 | Not Available | Positive | 9861951 - 9863513 | 53581.6 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | SCAB_RS42300 | Not Available | Positive | 9863520 - 9864950 | 49490.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |