Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4232 domain-containing protein | SCAB_RS42095 | Not Available | Positive | 9819315 - 9819890 | 19769.9 |
| hypothetical protein | SCAB_RS42100 | Not Available | Positive | 9820358 - 9820828 | 17708.8 |
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | SCAB_RS42105 | Not Available | Positive | 9821257 - 9822450 | 42777.2 |
| 5'-nucleotidase | SCAB_RS42110 | Not Available | Positive | 9822649 - 9823593 | 34506.6 |
| hypothetical protein | SCAB_RS42115 | Not Available | Positive | 9823723 - 9825639 | 69422.0 |
| duf4291 domain-containing protein | SCAB_RS42120 | Not Available | Positive | 9825746 - 9826306 | 21046.2 |
| padr family transcriptional regulator | SCAB_RS42125 | Not Available | Negative | 9826389 - 9826964 | 21632.8 |
| nuclear transport factor 2 family protein | SCAB_RS42130 | Not Available | Positive | 9827136 - 9827528 | 14159.9 |
| class i sam-dependent methyltransferase | SCAB_RS42135 | Not Available | Positive | 9827781 - 9828653 | 30973.7 |
| hypothetical protein | SCAB_RS42140 | Not Available | Positive | 9829119 - 9829688 | 18808.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |