Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | SCAB_RS41950 | Not Available | Positive | 9786267 - 9787421 | 41508.1 |
| alpha-ketoacid dehydrogenase subunit beta | SCAB_RS41955 | Not Available | Positive | 9787428 - 9788447 | 36759.0 |
| dihydrolipoamide acetyltransferase family protein | SCAB_RS41960 | Not Available | Positive | 9788444 - 9790084 | 56335.0 |
| thiolase family protein | SCAB_RS41965 | Not Available | Positive | 9790146 - 9791327 | 40790.8 |
| enoyl-coa hydratase/isomerase family protein | SCAB_RS41970 | Not Available | Positive | 9791324 - 9792091 | 27334.1 |
| 3-hydroxyacyl-coa dehydrogenase family protein | SCAB_RS41975 | Not Available | Positive | 9792088 - 9792930 | 28754.6 |
| fad-dependent monooxygenase | SCAB_RS41980 | Not Available | Positive | 9793131 - 9794615 | 53827.4 |
| paax family transcriptional regulator c-terminal domain-containing protein | SCAB_RS41985 | Not Available | Negative | 9794627 - 9795526 | 32967.4 |
| acyl-coa thioesterase | SCAB_RS41990 | Not Available | Negative | 9795523 - 9795996 | 17216.2 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | SCAB_RS41995 | Not Available | Negative | 9795993 - 9798368 | 86277.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |