Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SCAB_RS41800 | Not Available | Negative | 9754951 - 9755172 | 7825.6 |
| duf2975 domain-containing protein | SCAB_RS41805 | Not Available | Negative | 9755172 - 9755663 | 17207.8 |
| cellulase-like family protein | SCAB_RS41810 | Not Available | Negative | 9755758 - 9757020 | 46971.0 |
| glycoside hydrolase family 2 protein | SCAB_RS41815 | Not Available | Positive | 9757097 - 9759145 | 74962.8 |
| carbohydrate abc transporter permease | SCAB_RS41820 | Not Available | Negative | 9759244 - 9760173 | 33404.0 |
| carbohydrate abc transporter permease | SCAB_RS41825 | Not Available | Negative | 9760170 - 9761075 | 32327.7 |
| abc transporter substrate-binding protein | SCAB_RS41830 | Not Available | Negative | 9761140 - 9762489 | 48557.0 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS41835 | Not Available | Positive | 9762637 - 9763398 | 26368.2 |
| fadr/gntr family transcriptional regulator | SCAB_RS41840 | Not Available | Positive | 9763484 - 9764233 | 26691.6 |
| galactonate dehydratase | SCAB_RS41845 | Not Available | Positive | 9764230 - 9765375 | 41941.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |