Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | SCAB_RS41510 | Not Available | Negative | 9699547 - 9700410 | 30582.4 |
| abc transporter permease | SCAB_RS41515 | Not Available | Negative | 9700607 - 9701392 | 27806.4 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | SCAB_RS41520 | Not Available | Negative | 9701389 - 9702387 | 35613.2 |
| duf4097 family beta strand repeat-containing protein | SCAB_RS41525 | Not Available | Negative | 9702469 - 9703323 | 29773.8 |
| toxin-antitoxin system hicb family antitoxin | SCAB_RS41530 | Not Available | Negative | 9703418 - 9703933 | 18223.4 |
| mfs transporter | SCAB_RS41535 | Not Available | Negative | 9704200 - 9705405 | 40603.2 |
| hypothetical protein | SCAB_RS41540 | Not Available | Positive | 9705593 - 9706042 | 15478.1 |
| toprim nucleotidyl transferase/hydrolase domain-containing protein | SCAB_RS41545 | Not Available | Positive | 9706269 - 9706886 | 22162.9 |
| duf6400 family protein | SCAB_RS41550 | Not Available | Positive | 9706940 - 9707254 | 10844.5 |
| hypothetical protein | SCAB_RS41555 | Not Available | Positive | 9707241 - 9707498 | 9821.64 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |