Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SCAB_RS41465 | Not Available | Positive | 9685676 - 9686956 | 44870.3 |
| alpha-l-rhamnosidase | SCAB_RS41470 | Not Available | Positive | 9687060 - 9690197 | 112365.0 |
| alpha-l-rhamnosidase | SCAB_RS41475 | Not Available | Positive | 9690227 - 9693292 | 110970.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48880 | Not Available | Positive | 9693363 - 9693410 | 1753.1 |
| gntr family transcriptional regulator | SCAB_RS41480 | Not Available | Positive | 9693514 - 9693918 | 14862.3 |
| hypothetical protein | SCAB_RS41485 | Not Available | Negative | 9693933 - 9694727 | 27733.5 |
| hypothetical protein | SCAB_RS41490 | Not Available | Positive | 9694960 - 9695631 | 25035.9 |
| duf1684 domain-containing protein | SCAB_RS41495 | Not Available | Negative | 9695672 - 9696496 | 29145.1 |
| homoserine o-acetyltransferase metx | SCAB_RS41500 | Not Available | Negative | 9696493 - 9697677 | 41680.0 |
| bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase | SCAB_RS41505 | Not Available | Negative | 9697683 - 9699044 | 48250.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |