Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SCAB_RS41215 | Not Available | Positive | 9629805 - 9630791 | 36629.9 |
| srpbcc family protein | SCAB_RS41220 | Not Available | Positive | 9630801 - 9631256 | 16538.4 |
| cation:proton antiporter | SCAB_RS41225 | Not Available | Negative | 9631263 - 9632624 | 46086.9 |
| cation:proton antiporter regulatory subunit | SCAB_RS41230 | Not Available | Negative | 9632632 - 9633102 | 16676.8 |
| hamp domain-containing sensor histidine kinase | SCAB_RS41235 | Not Available | Positive | 9633445 - 9634542 | 37966.9 |
| response regulator transcription factor | SCAB_RS41240 | Not Available | Positive | 9634539 - 9635198 | 24555.7 |
| 2og-fe(ii) oxygenase family protein | SCAB_RS41245 | Not Available | Positive | 9635276 - 9636319 | 38768.7 |
| helix-turn-helix transcriptional regulator | SCAB_RS41250 | Not Available | Negative | 9636410 - 9637279 | 31184.4 |
| luxr c-terminal-related transcriptional regulator | SCAB_RS41255 | Not Available | Positive | 9637731 - 9638597 | 30552.7 |
| glycoside hydrolase family 5 protein | SCAB_RS41260 | Not Available | Negative | 9638673 - 9639713 | 37993.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |