Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-siderophore abc transporter substrate-binding protein | SCAB_RS40865 | Not Available | Positive | 9544885 - 9545955 | 37222.7 |
| mbth family protein | SCAB_RS40870 | Not Available | Negative | 9546026 - 9546235 | 7864.04 |
| non-ribosomal peptide synthetase | SCAB_RS40875 | Not Available | Negative | 9546250 - 9565308 | 684777.0 |
| feccd family abc transporter permease | SCAB_RS40880 | Not Available | Positive | 9565505 - 9566545 | 35096.9 |
| feccd family abc transporter permease | SCAB_RS40885 | Not Available | Positive | 9566828 - 9567937 | 37516.0 |
| abc transporter atp-binding protein | SCAB_RS40890 | Not Available | Positive | 9567942 - 9568856 | 32293.6 |
| methionyl-trna formyltransferase | SCAB_RS40895 | Not Available | Negative | 9568900 - 9569847 | 35132.6 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | SCAB_RS40900 | Not Available | Positive | 9569954 - 9571306 | 50030.2 |
| streptophobe family protein | SCAB_RS40905 | Not Available | Negative | 9571413 - 9572699 | 44158.8 |
| duf6777 domain-containing protein | SCAB_RS40910 | Not Available | Positive | 9572889 - 9574208 | 43846.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |