Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS40375 | Not Available | Negative | 9428287 - 9428781 | 18306.9 |
| mfs transporter | SCAB_RS40380 | Not Available | Negative | 9428898 - 9430256 | 46487.4 |
| arsr/smtb family transcription factor | SCAB_RS40385 | Not Available | Positive | 9430399 - 9430758 | 12806.2 |
| family 43 glycosylhydrolase | SCAB_RS40390 | Not Available | Negative | 9430810 - 9432915 | 78317.8 |
| (2fe-2s)-binding protein | SCAB_RS40395 | Not Available | Negative | 9433062 - 9433952 | 32087.2 |
| atp-grasp domain-containing protein | SCAB_RS40400 | Not Available | Positive | 9434164 - 9435378 | 43808.4 |
| iuca/iucc family protein | SCAB_RS40405 | Not Available | Positive | 9435375 - 9437189 | 64013.6 |
| iuca/iucc family protein | SCAB_RS40410 | Not Available | Positive | 9437269 - 9438981 | 62226.5 |
| type iii plp-dependent enzyme | SCAB_RS40415 | Not Available | Positive | 9439050 - 9440258 | 43295.6 |
| 4-hydroxybenzoate 3-monooxygenase | SCAB_RS40420 | Not Available | Positive | 9440445 - 9441635 | 43328.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |