Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS40325 | Not Available | Positive | 9419673 - 9420503 | 27685.0 |
| aldo/keto reductase | SCAB_RS40330 | Not Available | Positive | 9420500 - 9421516 | 36239.9 |
| l-rhamnose mutarotase | SCAB_RS40335 | Not Available | Positive | 9421513 - 9421824 | 11629.8 |
| amidohydrolase family protein | SCAB_RS40340 | Not Available | Positive | 9421821 - 9422699 | 31279.3 |
| energy-coupling factor abc transporter atp-binding protein | SCAB_RS40345 | Not Available | Negative | 9422681 - 9423523 | 29635.8 |
| cobalt ecf transporter t component cbiq | SCAB_RS40350 | Not Available | Negative | 9423520 - 9424269 | 26195.6 |
| energy-coupling factor abc transporter substrate-binding protein | SCAB_RS47910 | Not Available | Negative | 9424275 - 9424709 | 14821.5 |
| energy-coupling factor abc transporter permease | SCAB_RS40360 | Not Available | Negative | 9424706 - 9425419 | 24677.5 |
| hoxn/hupn/nixa family nickel/cobalt transporter | SCAB_RS40365 | Not Available | Positive | 9425991 - 9427067 | 38383.0 |
| substrate-binding domain-containing protein | SCAB_RS40370 | Not Available | Positive | 9427212 - 9428330 | 40158.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |