Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | SCAB_RS40175 | Not Available | Positive | 9387964 - 9388707 | 26354.6 |
| carbamoyltransferase | SCAB_RS40180 | Not Available | Positive | 9388919 - 9390931 | 73220.6 |
| glucose-1-phosphate thymidylyltransferase rfba | SCAB_RS40185 | Not Available | Positive | 9391119 - 9392027 | 33073.2 |
| dtdp-glucose 4,6-dehydratase | SCAB_RS40190 | Not Available | Positive | 9392024 - 9393004 | 36014.5 |
| o-methyltransferase | SCAB_RS40195 | Not Available | Negative | 9393121 - 9393789 | 24276.2 |
| hypothetical protein | SCAB_RS40200 | Not Available | Negative | 9393906 - 9394220 | 10867.8 |
| thioesterase ii family protein | SCAB_RS40205 | Not Available | Negative | 9394242 - 9395027 | 28389.7 |
| metallophosphoesterase family protein | SCAB_RS40210 | Not Available | Positive | 9395231 - 9396052 | 31286.2 |
| 4'-phosphopantetheinyl transferase family protein | SCAB_RS40215 | Not Available | Positive | 9396049 - 9396729 | 24619.2 |
| afsr/sarp family transcriptional regulator | SCAB_RS40220 | Not Available | Positive | 9396902 - 9398950 | 74975.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |