Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain-containing protein | SCAB_RS40070 | Not Available | Negative | 9298543 - 9299502 | 33554.5 |
| glycoside hydrolase family 75 protein | SCAB_RS40075 | Not Available | Positive | 9299932 - 9300660 | 25701.7 |
| dihydroxyacetone kinase phosphoryl donor subunit dham | SCAB_RS40080 | Not Available | Negative | 9300751 - 9301161 | 12843.1 |
| dihydroxyacetone kinase subunit dhal | SCAB_RS40085 | Not Available | Negative | 9301154 - 9301771 | 20518.2 |
| dihydroxyacetone kinase subunit dhak | SCAB_RS40090 | Not Available | Negative | 9301856 - 9302848 | 34508.4 |
| atp-binding protein | SCAB_RS49140 | Not Available | Negative | 9303982 - 9306753 | 99557.6 |
| malonyl transferase | SCAB_RS40105 | Not Available | Negative | 9307652 - 9308614 | 33996.0 |
| type i polyketide synthase | SCAB_RS40110 | Not Available | Positive | 9308913 - 9317447 | 296811.0 |
| type i polyketide synthase | SCAB_RS40115 | Not Available | Positive | 9317555 - 9331954 | 495978.0 |
| type i polyketide synthase | SCAB_RS40120 | Not Available | Positive | 9331969 - 9346881 | 520353.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |