Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | SCAB_RS39970 | Not Available | Positive | 9276230 - 9277276 | 36009.3 |
| aspartate ammonia-lyase | SCAB_RS39975 | Not Available | Positive | 9277487 - 9278899 | 49645.6 |
| glutaminase | SCAB_RS39980 | Not Available | Positive | 9278899 - 9279819 | 32534.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS39985 | Not Available | Positive | 9279926 - 9280717 | 27178.2 |
| d-alanyl-d-alanine carboxypeptidase family protein | SCAB_RS39990 | Not Available | Negative | 9280954 - 9282153 | 40755.7 |
| transcription termination factor rho | SCAB_RS39995 | Not Available | Negative | 9282234 - 9283376 | 41249.6 |
| hypothetical protein | SCAB_RS40000 | Not Available | Positive | 9283745 - 9285598 | 66698.3 |
| alpha-amylase family glycosyl hydrolase | SCAB_RS40005 | Not Available | Negative | 9285656 - 9287242 | 57679.5 |
| class i sam-dependent methyltransferase | SCAB_RS40010 | Not Available | Positive | 9287307 - 9288113 | 28919.6 |
| nuclear transport factor 2 family protein | SCAB_RS40015 | Not Available | Negative | 9288364 - 9288786 | 15904.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |