Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4395 domain-containing protein | SCAB_RS39520 | Not Available | Negative | 9165651 - 9166067 | 14425.9 |
| thioredoxin family protein | SCAB_RS39525 | Not Available | Positive | 9166143 - 9166556 | 14662.0 |
| flavin reductase family protein | SCAB_RS39530 | Not Available | Positive | 9166738 - 9167247 | 17524.9 |
| electron transfer flavoprotein subunit beta/fixa family protein | SCAB_RS39535 | Not Available | Positive | 9167452 - 9168237 | 27453.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | SCAB_RS39540 | Not Available | Positive | 9168331 - 9169293 | 32423.5 |
| endonuclease/exonuclease/phosphatase family protein | SCAB_RS39545 | Not Available | Negative | 9169350 - 9170255 | 33398.6 |
| duf6986 family protein | SCAB_RS39550 | Not Available | Positive | 9170447 - 9171754 | 46391.6 |
| serine/threonine-protein kinase | SCAB_RS39555 | Not Available | Positive | 9171898 - 9173748 | 62611.9 |
| hypothetical protein | SCAB_RS39560 | Not Available | Negative | 9173775 - 9174539 | 27462.8 |
| laci family dna-binding transcriptional regulator | SCAB_RS39565 | Not Available | Negative | 9174545 - 9175594 | 37639.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |