Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS39320 | Not Available | Negative | 9123417 - 9123781 | 12603.3 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS39325 | Not Available | Negative | 9124057 - 9126229 | 75635.0 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | SCAB_RS39330 | Not Available | Negative | 9126307 - 9126924 | 22348.0 |
| apc family permease | SCAB_RS39335 | Not Available | Positive | 9127065 - 9128561 | 51115.2 |
| amidohydrolase | SCAB_RS39340 | Not Available | Positive | 9128619 - 9130190 | 55099.2 |
| phenylacetate--coa ligase paak | SCAB_RS39345 | Not Available | Negative | 9130424 - 9131755 | 49084.0 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | SCAB_RS39350 | Not Available | Positive | 9131952 - 9132965 | 38243.9 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | SCAB_RS39355 | Not Available | Positive | 9132962 - 9133342 | 13682.7 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | SCAB_RS39360 | Not Available | Positive | 9133353 - 9134180 | 30204.5 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | SCAB_RS39365 | Not Available | Positive | 9134174 - 9134680 | 18280.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |