Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS29290 | Not Available | Positive | 6793048 - 6793524 | 17625.7 |
| Lysin a | SCAB_RS29295 | Not Available | Positive | 6793536 - 6793808 | 10254.0 |
| Hypothetical protein | SCAB_RS29300 | Not Available | Positive | 6793820 - 6794557 | 26955.9 |
| hypothetical protein | SCAB_RS29305 | Not Available | Positive | 6794567 - 6794752 | 5995.24 |
| Hypothetical protein | SCAB_RS29310 | Not Available | Positive | 6794749 - 6795069 | 11521.1 |
| Hypothetical protein | SCAB_RS29315 | Not Available | Negative | 6795562 - 6795780 | 7378.62 |
| Dna binding protein | SCAB_RS29320 | Not Available | Negative | 6795773 - 6796648 | 33115.6 |
| gntr family transcriptional regulator | SCAB_RS29325 | Not Available | Negative | 6796902 - 6797183 | 9932.79 |
| hypothetical protein | SCAB_RS29330 | Not Available | Positive | 6797349 - 6797657 | 11228.6 |
| Hypothetical protein | SCAB_RS29335 | Not Available | Positive | 6797660 - 6797884 | 7808.36 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |