Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pucr family transcriptional regulator | SCAB_RS38755 | Not Available | Positive | 8988521 - 8989738 | 44338.9 |
| haloacid dehalogenase type ii | SCAB_RS38765 | Not Available | Positive | 8990253 - 8990936 | 25473.3 |
| iclr family transcriptional regulator | SCAB_RS38770 | Not Available | Negative | 8991264 - 8992007 | 26875.4 |
| iclr family transcriptional regulator | SCAB_RS38775 | Not Available | Negative | 8992171 - 8992917 | 26726.0 |
| n-methyl-l-tryptophan oxidase | SCAB_RS38780 | Not Available | Positive | 8993091 - 8994338 | 45458.6 |
| succinylglutamate desuccinylase/aspartoacylase family protein | SCAB_RS38785 | Not Available | Positive | 8994341 - 8995402 | 36705.4 |
| abc transporter substrate-binding protein | SCAB_RS38790 | Not Available | Positive | 8995485 - 8996597 | 40264.7 |
| abc transporter atp-binding protein | SCAB_RS38795 | Not Available | Positive | 8996590 - 8997729 | 40423.0 |
| abc transporter permease | SCAB_RS38800 | Not Available | Positive | 8997733 - 8998629 | 31752.0 |
| abc transporter permease | SCAB_RS38805 | Not Available | Positive | 8998629 - 8999492 | 30036.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |