Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SCAB_RS38325 | Not Available | Negative | 8872912 - 8874693 | 63482.0 |
| abc transporter transmembrane domain-containing protein | SCAB_RS38330 | Not Available | Negative | 8874690 - 8876561 | 65927.5 |
| hypothetical protein | SCAB_RS38335 | Not Available | Positive | 8877008 - 8877700 | 24687.8 |
| peptide-n4-asparagine amidase | SCAB_RS38340 | Not Available | Positive | 8877770 - 8879380 | 58574.4 |
| cation:dicarboxylate symporter family transporter | SCAB_RS38345 | Not Available | Positive | 8879525 - 8881000 | 50991.2 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS38350 | Not Available | Negative | 8881186 - 8881641 | 16981.5 |
| abc transporter atp-binding protein | SCAB_RS38355 | Not Available | Positive | 8881756 - 8883657 | 68483.6 |
| endolytic transglycosylase mltg | SCAB_RS38360 | Not Available | Positive | 8883711 - 8884589 | 31314.3 |
| nad(p)-binding domain-containing protein | SCAB_RS38365 | Not Available | Negative | 8884614 - 8885693 | 38915.1 |
| secondary thiamine-phosphate synthase enzyme yjbq | SCAB_RS38370 | Not Available | Positive | 8885835 - 8886257 | 15141.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |