Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS38075 | Not Available | Positive | 8798843 - 8799154 | 10728.9 |
| rna polymerase sigma factor | SCAB_RS38080 | Not Available | Positive | 8799274 - 8800134 | 31095.7 |
| ricin-type beta-trefoil lectin domain protein | SCAB_RS38085 | Not Available | Positive | 8800690 - 8802147 | 52160.1 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | SCAB_RS38090 | Not Available | Positive | 8802160 - 8805006 | 102156.0 |
| thif family adenylyltransferase | SCAB_RS38095 | Not Available | Negative | 8805124 - 8807034 | 69091.7 |
| luxr c-terminal-related transcriptional regulator | SCAB_RS46085 | Not Available | Negative | 8807131 - 8807928 | 28108.7 |
| acyl carrier protein | SCAB_RS38105 | Not Available | Positive | 8809277 - 8809552 | 10072.9 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | SCAB_RS38110 | Not Available | Positive | 8809549 - 8810046 | 18412.5 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | SCAB_RS38115 | Not Available | Positive | 8810043 - 8811185 | 38623.8 |
| hypothetical protein | SCAB_RS38120 | Not Available | Positive | 8811182 - 8811709 | 18345.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |