Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SCAB_RS37975 | Not Available | Positive | 8768651 - 8769004 | 12867.6 |
| nad-dependent epimerase/dehydratase family protein | SCAB_RS37980 | Not Available | Positive | 8769734 - 8770657 | 31783.6 |
| amp-binding protein | SCAB_RS37985 | Not Available | Positive | 8770715 - 8772364 | 60115.0 |
| methyltransferase domain-containing protein | SCAB_RS43905 | Not Available | Negative | 8772472 - 8773284 | 28500.2 |
| ricin domain-containing protein | SCAB_RS37995 | Not Available | Positive | 8773665 - 8776502 | 97958.6 |
| lectin | SCAB_RS38000 | Not Available | Positive | 8776532 - 8778244 | 60046.3 |
| ricin-type beta-trefoil lectin domain protein | SCAB_RS38005 | Not Available | Negative | 8778301 - 8779629 | 46240.9 |
| arabinofuranosidase catalytic domain-containing protein | SCAB_RS38010 | Not Available | Negative | 8779658 - 8781142 | 50668.7 |
| thua domain-containing protein | SCAB_RS38015 | Not Available | Negative | 8781212 - 8784766 | 125470.0 |
| sugar abc transporter atp-binding protein | SCAB_RS38020 | Not Available | Positive | 8785446 - 8786993 | 54983.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |