Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | SCAB_RS37925 | Not Available | Positive | 8753769 - 8754182 | 14751.5 |
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | SCAB_RS37930 | Not Available | Negative | 8754206 - 8755684 | 53269.9 |
| endo-1,4-beta-xylanase | SCAB_RS37935 | Not Available | Positive | 8756276 - 8757706 | 50826.3 |
| ricin domain-containing protein | SCAB_RS37940 | Not Available | Positive | 8757807 - 8759111 | 45065.1 |
| metallophosphoesterase | SCAB_RS37945 | Not Available | Negative | 8759207 - 8760427 | 43824.1 |
| duf6243 family protein | SCAB_RS37950 | Not Available | Positive | 8760715 - 8760924 | 7579.77 |
| pucr family transcriptional regulator | SCAB_RS37955 | Not Available | Negative | 8761076 - 8762701 | 58942.5 |
| aspartate aminotransferase family protein | SCAB_RS37960 | Not Available | Positive | 8762954 - 8764222 | 44612.2 |
| fad-binding and (fe-s)-binding domain-containing protein | SCAB_RS37965 | Not Available | Positive | 8764219 - 8767113 | 102450.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | SCAB_RS37970 | Not Available | Positive | 8767110 - 8768549 | 50826.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |