Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | SCAB_RS37725 | Not Available | Positive | 8699581 - 8700588 | 34388.8 |
| nitrate- and nitrite sensing domain-containing protein | SCAB_RS37730 | Not Available | Positive | 8700909 - 8703338 | 87105.4 |
| roadblock/lc7 domain-containing protein | SCAB_RS37735 | Not Available | Positive | 8703385 - 8703813 | 14782.9 |
| duf742 domain-containing protein | SCAB_RS37740 | Not Available | Positive | 8703815 - 8704171 | 12669.8 |
| gtp-binding protein | SCAB_RS37745 | Not Available | Positive | 8704158 - 8704733 | 20691.9 |
| tetr/acrr family transcriptional regulator | SCAB_RS37750 | Not Available | Negative | 8704745 - 8705350 | 22880.4 |
| discoidin domain-containing protein | SCAB_RS37755 | Not Available | Negative | 8705379 - 8707397 | 73263.3 |
| hgxxpaaw family protein | SCAB_RS37760 | Not Available | Negative | 8707948 - 8708325 | 12650.2 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS37765 | Not Available | Positive | 8708444 - 8708905 | 16931.3 |
| cellulase family glycosylhydrolase | SCAB_RS37770 | Not Available | Positive | 8709354 - 8711024 | 57803.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |