Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | SCAB_RS37675 | Not Available | Negative | 8689922 - 8690863 | 32947.2 |
| helix-turn-helix domain-containing protein | SCAB_RS37680 | Not Available | Positive | 8690941 - 8691537 | 21810.2 |
| nadph:quinone oxidoreductase family protein | SCAB_RS37685 | Not Available | Positive | 8691652 - 8692629 | 33760.3 |
| acyl-coa dehydrogenase family protein | SCAB_RS37690 | Not Available | Positive | 8692626 - 8693810 | 43532.9 |
| acyl-coa dehydrogenase family protein | SCAB_RS37695 | Not Available | Positive | 8693807 - 8694901 | 37561.7 |
| phosphatidylinositol-specific phospholipase c/glycerophosphodiester phosphodiesterase family protein | SCAB_RS37700 | Not Available | Positive | 8695085 - 8695954 | 31511.6 |
| hypothetical protein | SCAB_RS37705 | Not Available | Positive | 8696057 - 8696251 | 6582.4 |
| phosphodiester glycosidase family protein | SCAB_RS37710 | Not Available | Negative | 8696280 - 8697449 | 38468.4 |
| duf779 domain-containing protein | SCAB_RS37715 | Not Available | Negative | 8697565 - 8697939 | 13357.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS37720 | Not Available | Negative | 8697998 - 8699035 | 35899.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |