Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | SCAB_RS37225 | Not Available | Negative | 8595777 - 8596337 | 19390.9 |
| tetr/acrr family transcriptional regulator | SCAB_RS37230 | Not Available | Positive | 8596458 - 8597114 | 23647.7 |
| aaa family atpase | SCAB_RS37235 | Not Available | Positive | 8597231 - 8598166 | 33882.5 |
| vwa domain-containing protein | SCAB_RS37240 | Not Available | Positive | 8598163 - 8599719 | 54576.9 |
| voc family protein | SCAB_RS37245 | Not Available | Negative | 8599742 - 8600110 | 13321.7 |
| universal stress protein | SCAB_RS37250 | Not Available | Positive | 8600188 - 8601114 | 32876.4 |
| coa-binding protein | SCAB_RS37255 | Not Available | Negative | 8601239 - 8601655 | 14919.8 |
| hypothetical protein | SCAB_RS37260 | Not Available | Positive | 8601835 - 8602584 | 26351.1 |
| sixa phosphatase family protein | SCAB_RS37265 | Not Available | Positive | 8602581 - 8603126 | 19205.0 |
| yigz family protein | SCAB_RS37270 | Not Available | Positive | 8603204 - 8603830 | 22293.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |