Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family protein-serine/threonine phosphatase | SCAB_RS02925 | Not Available | Negative | 697731 - 698924 | 42683.7 |
| duf6153 family protein | SCAB_RS02930 | Not Available | Positive | 699155 - 699619 | 15264.7 |
| duf305 domain-containing protein | SCAB_RS02935 | Not Available | Positive | 699714 - 700385 | 23788.0 |
| blai/meci/copy family transcriptional regulator | SCAB_RS02940 | Not Available | Positive | 700543 - 700911 | 13942.8 |
| m56 family metallopeptidase | SCAB_RS02945 | Not Available | Positive | 700908 - 701843 | 32436.9 |
| duf5134 domain-containing protein | SCAB_RS43610 | Not Available | Negative | 701906 - 702607 | 23078.4 |
| duf4396 domain-containing protein | SCAB_RS02955 | Not Available | Positive | 702825 - 703361 | 18500.4 |
| fg-gap and vcbs repeat-containing protein | SCAB_RS02960 | Not Available | Positive | 703485 - 704930 | 48005.9 |
| snapalysin family zinc-dependent metalloprotease | SCAB_RS02965 | Not Available | Negative | 705052 - 705615 | 19208.7 |
| ricin-type beta-trefoil lectin domain protein | SCAB_RS02970 | Not Available | Negative | 705750 - 707519 | 61238.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |