Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase c-terminal domain-containing protein | SCAB_RS36935 | Not Available | Positive | 8520800 - 8521096 | 10538.5 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS36940 | Not Available | Negative | 8521083 - 8522084 | 36602.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48780 | Not Available | Positive | 8522349 - 8522651 | 11343.4 |
| fad-binding protein | SCAB_RS48785 | Not Available | Positive | 8522848 - 8523282 | 14806.5 |
| iclr family transcriptional regulator | SCAB_RS36950 | Not Available | Positive | 8523507 - 8524310 | 28882.0 |
| alpha/beta fold hydrolase | SCAB_RS45575 | Not Available | Positive | 8524554 - 8524802 | 8634.61 |
| hypothetical protein | SCAB_RS36955 | Not Available | Positive | 8524744 - 8524929 | 7062.35 |
| glycosyl hydrolase | SCAB_RS36960 | Not Available | Positive | 8525111 - 8528008 | 104217.0 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS36965 | Not Available | Positive | 8528064 - 8528834 | 26400.4 |
| duf5597 domain-containing protein | SCAB_RS36970 | Not Available | Negative | 8528828 - 8530441 | 57986.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |