Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS36795 | Not Available | Positive | 8489606 - 8489881 | 9835.73 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS45555 | Not Available | Negative | 8489934 - 8490322 | 14060.7 |
| mbl fold metallo-hydrolase | SCAB_RS36800 | Not Available | Positive | 8490519 - 8491883 | 47665.1 |
| rhodanese-like domain-containing protein | SCAB_RS36805 | Not Available | Positive | 8491919 - 8492284 | 12873.3 |
| sulfite exporter taue/safe family protein | SCAB_RS36810 | Not Available | Positive | 8492281 - 8493024 | 23934.0 |
| rhodanese-like domain-containing protein | SCAB_RS36815 | Not Available | Positive | 8493161 - 8493736 | 20022.2 |
| metal-sensitive transcriptional regulator | SCAB_RS36820 | Not Available | Negative | 8493849 - 8494130 | 10105.3 |
| tetr/acrr family transcriptional regulator | SCAB_RS36825 | Not Available | Positive | 8494285 - 8494716 | 16072.3 |
| laci family dna-binding transcriptional regulator | SCAB_RS36830 | Not Available | Negative | 8494969 - 8495976 | 35467.6 |
| glycoside hydrolase family 1 protein | SCAB_RS36835 | Not Available | Positive | 8496316 - 8497605 | 48147.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |