Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | SCAB_RS36710 | Not Available | Negative | 8470056 - 8471630 | 56017.5 |
| nuclear transport factor 2 family protein | SCAB_RS36715 | Not Available | Negative | 8471853 - 8472347 | 18068.2 |
| duf4291 domain-containing protein | SCAB_RS36720 | Not Available | Positive | 8472530 - 8473180 | 24856.7 |
| duf6585 family protein | SCAB_RS36725 | Not Available | Negative | 8473213 - 8474043 | 29439.1 |
| expansin exlx1 family cellulose-binding protein | SCAB_RS36730 | Not Available | Negative | 8474195 - 8475163 | 33820.7 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS36735 | Not Available | Positive | 8475386 - 8476126 | 25055.9 |
| chloramphenicol phosphotransferase cpt family protein | SCAB_RS36740 | Not Available | Negative | 8476460 - 8477062 | 22073.4 |
| hypothetical protein | SCAB_RS36745 | Not Available | Negative | 8477059 - 8477241 | 6541.64 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS45535 | Not Available | Negative | 8477342 - 8477482 | 4997.42 |
| hypothetical protein | SCAB_RS46705 | Not Available | Positive | 8477546 - 8477971 | 15203.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |