Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | SCAB_RS36610 | Not Available | Negative | 8453323 - 8453751 | 15152.1 |
| clp protease n-terminal domain-containing protein | SCAB_RS36615 | Not Available | Positive | 8454095 - 8454637 | 18578.9 |
| eama family transporter | SCAB_RS36620 | Not Available | Positive | 8454690 - 8455688 | 33907.0 |
| pyridoxamine 5'-phosphate oxidase family protein | SCAB_RS36625 | Not Available | Negative | 8455737 - 8456423 | 24696.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SCAB_RS36630 | Not Available | Positive | 8456459 - 8457790 | 46086.1 |
| dmt family transporter | SCAB_RS36635 | Not Available | Negative | 8457806 - 8458735 | 32291.2 |
| lysr family transcriptional regulator | SCAB_RS36640 | Not Available | Positive | 8458810 - 8459718 | 32971.7 |
| pyridoxamine 5'-phosphate oxidase family protein | SCAB_RS36645 | Not Available | Negative | 8459792 - 8460253 | 17376.6 |
| cysteine hydrolase | SCAB_RS36650 | Not Available | Positive | 8460363 - 8461037 | 23673.5 |
| rieske (2fe-2s) protein | SCAB_RS36655 | Not Available | Negative | 8461024 - 8461524 | 15861.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |