Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | SCAB_RS36360 | Not Available | Positive | 8390143 - 8391300 | 40908.0 |
| sgnh/gdsl hydrolase family protein | SCAB_RS36365 | Not Available | Positive | 8391297 - 8392145 | 29883.8 |
| biotin-dependent carboxyltransferase family protein | SCAB_RS36370 | Not Available | Negative | 8392165 - 8393037 | 29747.0 |
| 5-oxoprolinase subunit b family protein | SCAB_RS36375 | Not Available | Negative | 8393034 - 8393645 | 21339.5 |
| lamb/ycsf family protein | SCAB_RS36380 | Not Available | Negative | 8393642 - 8394400 | 25948.9 |
| putative hydro-lyase | SCAB_RS36385 | Not Available | Negative | 8394444 - 8395310 | 31009.9 |
| mfs transporter | SCAB_RS36390 | Not Available | Negative | 8395307 - 8396626 | 45961.8 |
| gntr family transcriptional regulator | SCAB_RS36395 | Not Available | Positive | 8396808 - 8397503 | 26022.9 |
| hypothetical protein | SCAB_RS36400 | Not Available | Positive | 8397591 - 8399114 | 55199.5 |
| hypothetical protein | SCAB_RS36405 | Not Available | Positive | 8399235 - 8400113 | 30960.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |