Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | SCAB_RS36075 | Not Available | Positive | 8323764 - 8324966 | 42057.4 |
| methionine adenosyltransferase | SCAB_RS36080 | Not Available | Positive | 8325207 - 8326415 | 43520.5 |
| primosomal protein n' | SCAB_RS36085 | Not Available | Positive | 8326548 - 8328737 | 76347.2 |
| hypothetical protein | SCAB_RS36090 | Not Available | Negative | 8328822 - 8329391 | 20120.9 |
| methionyl-trna formyltransferase | SCAB_RS36095 | Not Available | Positive | 8329683 - 8330615 | 32629.2 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SCAB_RS36100 | Not Available | Positive | 8330748 - 8332178 | 51313.3 |
| mmpl family transporter | SCAB_RS36105 | Not Available | Negative | 8332159 - 8334300 | 75036.6 |
| ribulose-phosphate 3-epimerase | SCAB_RS36110 | Not Available | Positive | 8334462 - 8335148 | 24202.0 |
| sugar-binding transcriptional regulator | SCAB_RS36115 | Not Available | Positive | 8335286 - 8336329 | 37009.1 |
| guab1 family imp dehydrogenase-related protein | SCAB_RS36120 | Not Available | Positive | 8336690 - 8338132 | 50943.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |