Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trar/dksa family transcriptional regulator | SCAB_RS02825 | Not Available | Positive | 682384 - 682710 | 12262.7 |
| trar/dksa family transcriptional regulator | SCAB_RS02830 | Not Available | Positive | 682758 - 683138 | 14177.0 |
| rod shape-determining protein | SCAB_RS02835 | Not Available | Positive | 683135 - 683941 | 27705.6 |
| sgnh/gdsl hydrolase family protein | SCAB_RS02840 | Not Available | Positive | 683951 - 684739 | 27983.6 |
| apc family permease | SCAB_RS02845 | Not Available | Positive | 685128 - 686612 | 51724.2 |
| hypothetical protein | SCAB_RS02850 | Not Available | Positive | 686623 - 687582 | 35334.5 |
| yihy/virulence factor brkb family protein | SCAB_RS02855 | Not Available | Negative | 687646 - 688611 | 33911.4 |
| polyphosphate kinase 2 | SCAB_RS02860 | Not Available | Negative | 688708 - 689664 | 36215.9 |
| duf6411 family protein | SCAB_RS02865 | Not Available | Negative | 689680 - 689922 | 8452.52 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS02870 | Not Available | Negative | 690026 - 690535 | 18181.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |