Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase catalytic subunit | SCAB_RS36025 | Not Available | Positive | 8312756 - 8313736 | 35624.9 |
| dihydroorotase | SCAB_RS36030 | Not Available | Positive | 8313741 - 8315027 | 45151.7 |
| hypothetical protein | SCAB_RS36035 | Not Available | Positive | 8315024 - 8315590 | 20407.2 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | SCAB_RS36040 | Not Available | Positive | 8315587 - 8316729 | 41029.7 |
| carbamoyl-phosphate synthase large subunit | SCAB_RS36045 | Not Available | Positive | 8316722 - 8320030 | 117826.0 |
| quinone-dependent dihydroorotate dehydrogenase | SCAB_RS36050 | Not Available | Positive | 8320111 - 8321217 | 39826.2 |
| orotidine-5'-phosphate decarboxylase | SCAB_RS36055 | Not Available | Positive | 8321214 - 8322065 | 29370.0 |
| integration host factor | SCAB_RS36060 | Not Available | Positive | 8322319 - 8322642 | 11556.0 |
| guanylate kinase | SCAB_RS36065 | Not Available | Positive | 8322703 - 8323296 | 21831.1 |
| dna-directed rna polymerase subunit omega | SCAB_RS36070 | Not Available | Positive | 8323361 - 8323630 | 9567.38 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |