Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | SCAB_RS35625 | Not Available | Positive | 8229973 - 8230803 | 29295.2 |
| gnat family n-acetyltransferase | SCAB_RS35630 | Not Available | Positive | 8230981 - 8231619 | 23970.0 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | SCAB_RS35635 | Not Available | Positive | 8231745 - 8232956 | 42156.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SCAB_RS35640 | Not Available | Positive | 8233304 - 8237755 | 151752.0 |
| uroporphyrinogen-iii c-methyltransferase | SCAB_RS35645 | Not Available | Positive | 8237948 - 8239180 | 42912.5 |
| trmh family rna methyltransferase | SCAB_RS35650 | Not Available | Positive | 8239288 - 8240106 | 29569.6 |
| serine/threonine-protein kinase | SCAB_RS35655 | Not Available | Negative | 8240169 - 8241485 | 46351.3 |
| hypothetical protein | SCAB_RS35660 | Not Available | Positive | 8241682 - 8241921 | 8698.34 |
| hypothetical protein | SCAB_RS35665 | Not Available | Positive | 8242174 - 8242374 | 7247.02 |
| phosphotransferase family protein | SCAB_RS35670 | Not Available | Positive | 8243456 - 8244403 | 32951.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |