Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh12 family glycosyl hydrolase domain-containing protein | SCAB_RS02775 | Not Available | Positive | 670576 - 671718 | 38985.0 |
| duf5707 domain-containing protein | SCAB_RS02780 | Not Available | Negative | 671792 - 672244 | 15151.8 |
| alpha/beta hydrolase family esterase | SCAB_RS02785 | Not Available | Negative | 672446 - 673363 | 32135.8 |
| glycoside hydrolase 43 family protein | SCAB_RS02790 | Not Available | Positive | 673885 - 675531 | 59241.7 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS02795 | Not Available | Positive | 675584 - 676642 | 37693.5 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | SCAB_RS02800 | Not Available | Negative | 676753 - 677535 | 27761.1 |
| protein translocase subunit secd | SCAB_RS02805 | Not Available | Negative | 677628 - 679886 | 78592.0 |
| hypothetical protein | SCAB_RS02810 | Not Available | Negative | 679953 - 680378 | 13949.5 |
| response regulator | SCAB_RS02815 | Not Available | Negative | 680475 - 681140 | 24666.1 |
| hamp domain-containing sensor histidine kinase | SCAB_RS02820 | Not Available | Negative | 681137 - 682090 | 34357.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |