Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SCAB_RS35480 | Not Available | Positive | 8199253 - 8199690 | 15843.8 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS35485 | Not Available | Positive | 8199797 - 8200369 | 20681.6 |
| duf6314 family protein | SCAB_RS48765 | Not Available | Negative | 8200388 - 8200837 | 16586.6 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | SCAB_RS35490 | Not Available | Positive | 8200998 - 8203481 | 90292.6 |
| lysr substrate-binding domain-containing protein | SCAB_RS35495 | Not Available | Negative | 8203518 - 8204270 | 27134.2 |
| duf5997 family protein | SCAB_RS35500 | Not Available | Positive | 8204371 - 8204775 | 14821.5 |
| hypothetical protein | SCAB_RS35505 | Not Available | Positive | 8204875 - 8206398 | 52844.0 |
| voc family protein | SCAB_RS35510 | Not Available | Negative | 8206411 - 8207151 | 26550.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SCAB_RS35515 | Not Available | Positive | 8207308 - 8208339 | 35023.9 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | SCAB_RS35520 | Not Available | Positive | 8208336 - 8209514 | 40465.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |