Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SCAB_RS02730 | Not Available | Positive | 656962 - 657888 | 33079.1 |
| caib/baif coa transferase family protein | SCAB_RS02735 | Not Available | Positive | 658079 - 659296 | 44075.1 |
| hpch/hpai aldolase/citrate lyase family protein | SCAB_RS02740 | Not Available | Positive | 659286 - 660260 | 33822.6 |
| tetr/acrr family transcriptional regulator | SCAB_RS02745 | Not Available | Positive | 660355 - 660978 | 22178.6 |
| mfs transporter | SCAB_RS02750 | Not Available | Negative | 661049 - 662236 | 38458.4 |
| bifunctional cytochrome p450/nadph--p450 reductase | SCAB_RS02755 | Not Available | Negative | 662435 - 665647 | 117063.0 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS02760 | Not Available | Positive | 665891 - 666661 | 26743.4 |
| spoiie family protein phosphatase | SCAB_RS02765 | Not Available | Negative | 666763 - 669240 | 88349.3 |
| mbl fold metallo-hydrolase | SCAB_RS02770 | Not Available | Negative | 669388 - 669951 | 20189.8 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS49340 | Not Available | Positive | 670080 - 670250 | 6400.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |