Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter cora | SCAB_RS34985 | Not Available | Negative | 8083665 - 8084657 | 36485.6 |
| histidine phosphatase family protein | SCAB_RS34990 | Not Available | Positive | 8084762 - 8085448 | 24458.1 |
| duf3090 domain-containing protein | SCAB_RS34995 | Not Available | Positive | 8085546 - 8086136 | 21292.1 |
| sco1664 family protein | SCAB_RS35000 | Not Available | Positive | 8086100 - 8086969 | 30568.1 |
| cysteine--1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | SCAB_RS35005 | Not Available | Positive | 8087126 - 8088355 | 44315.6 |
| smp-30/gluconolactonase/lre family protein | SCAB_RS35010 | Not Available | Positive | 8088935 - 8089918 | 33992.5 |
| pac2 family protein | SCAB_RS35015 | Not Available | Negative | 8089991 - 8091028 | 36987.0 |
| fadr/gntr family transcriptional regulator | SCAB_RS35020 | Not Available | Negative | 8091200 - 8091871 | 24430.3 |
| s-methyl-5-thioribose-1-phosphate isomerase | SCAB_RS35025 | Not Available | Positive | 8092122 - 8093153 | 36289.4 |
| methylthioribulose 1-phosphate dehydratase | SCAB_RS35030 | Not Available | Negative | 8093213 - 8093821 | 21256.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |