Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SCAB_RS34685 | Not Available | Negative | 8018576 - 8019364 | 27398.9 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | SCAB_RS34690 | Not Available | Negative | 8019361 - 8020329 | 34425.4 |
| tetr/acrr family transcriptional regulator | SCAB_RS34695 | Not Available | Positive | 8020393 - 8021112 | 26606.9 |
| type isp restriction/modification enzyme | SCAB_RS34700 | Not Available | Negative | 8021120 - 8022313 | 43134.7 |
| gntr family transcriptional regulator | SCAB_RS34705 | Not Available | Negative | 8022335 - 8023084 | 27852.3 |
| homogentisate 1,2-dioxygenase | SCAB_RS34710 | Not Available | Negative | 8023113 - 8024438 | 48140.3 |
| tetr/acrr family transcriptional regulator | SCAB_RS34715 | Not Available | Positive | 8024726 - 8025343 | 23107.7 |
| molybdopterin oxidoreductase family protein | SCAB_RS34720 | Not Available | Positive | 8026098 - 8028365 | 79126.8 |
| citmhs family transporter | SCAB_RS34725 | Not Available | Positive | 8028487 - 8029950 | 51291.9 |
| mfs transporter | SCAB_RS34730 | Not Available | Positive | 8030030 - 8031304 | 42682.2 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |