Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SCAB_RS34590 | Not Available | Negative | 7999022 - 7999396 | 13159.6 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS34595 | Not Available | Positive | 7999504 - 7999950 | 15912.9 |
| esterase/lipase family protein | SCAB_RS34600 | Not Available | Positive | 8000124 - 8000993 | 30146.1 |
| dienelactone hydrolase family protein | SCAB_RS34605 | Not Available | Positive | 8001356 - 8002120 | 26982.8 |
| hypothetical protein | SCAB_RS49110 | Not Available | Negative | 8002224 - 8002358 | 5407.41 |
| class i sam-dependent methyltransferase | SCAB_RS34610 | Not Available | Positive | 8002496 - 8003155 | 23400.9 |
| duf402 domain-containing protein | SCAB_RS34615 | Not Available | Negative | 8003160 - 8003663 | 18286.3 |
| gnat family n-acetyltransferase | SCAB_RS34620 | Not Available | Negative | 8003644 - 8004573 | 33640.7 |
| gntr family transcriptional regulator | SCAB_RS34625 | Not Available | Positive | 8004644 - 8005012 | 12755.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS45470 | Not Available | Negative | 8005109 - 8005832 | 27815.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |